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5.5 UPgrade

Mon, 14/09/2009 - 19:32 — John E. Rogers04

I am also finding that my large programs will not open.  So I am sending you versions of the same model at different levesls of development for you to play with.

Reporter: 
John E. Rogers04
Created: 
Mon, 14/09/2009 - 19:32
Updated: 
Mon, 05/10/2009 - 07:16

Not being able to run models in Simile 5.5

Fri, 11/09/2009 - 19:28 — rboumans

I just updated from 5.3 to 5.5 and now seem to have problems with running my more elaborate models.

 

The applications opens up and then stops (nothing happens after): displaying the message under "Progress with current operations" Reading information from file. 

 

I have a number of these larger models all do the same.  Any ideas?  I am attaching one of them to try out

Reporter: 
rboumans
Created: 
Fri, 11/09/2009 - 19:28
Updated: 
Wed, 16/06/2010 - 19:19

Simile v5.5 released

Wed, 26/08/2009 - 15:33 — jaspert

Simile version 5.5 was released on 21st August 2009. It is essentially a maintenance release, but incorporates some new features...

New constraint checking
 

Simile v5.5 contains some new checks that are applied when running a model to make sure it is consistent. These include:

Make new version of Simile available to from UberCart downloads

Wed, 19/08/2009 - 19:45 — jonathanm

 Make new version of Simile available to from UberCart downloads

Making files available to users

Tue, 07/07/2009 - 11:24 — jonathanm

Making files available to users

E-learning discusion Drupal group on www.simulistics.com

Fri, 26/06/2009 - 11:42 — jonathanm

The e-learning discusion Drupal group on www.simulistics.com has been created with us all as members.

 

 

Initial version of the Plant Systems-biology Modelling (PlaSMo) website online

Fri, 22/05/2009 - 16:41 — jonathanm

The initial version of the Plant Systems-biology Modelling (PlaSMo) website is now online.  The website provides introductory information about the project.

Tags: 
PlasMo
systems biology

Introduction to Simile

Sun, 17/05/2009 - 13:36 — jyearsle

Here's a pdf document which I'm going to use as the basis of a practical class to introduce Simile and how it can be used to develop and analyse a model. It is aimed at undergraduate biology/ecology students whoc will have little if any programming experience and even less mathematics.

This is the first time I've written anything like this. If people see potential pitfalls in the approach or ways to improve the description to make it clearer then I'd like to hear about it.

Jon

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